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Devboard UART influence on PCA10040

I'm trying to get the nRF52 on the PCA10040 dev board communicating through UART without the use of the programmer built into the dev board. So I'm connecting the UART pins directly to the headers of the devboard.

Given that I'm currently experiencing issues on getting the connectivity through the pins from the headers, can someone please confirm that the Segger chip has no way of interfering with the connections with the exposed header pins? If the board is powered by the micro USB port, does the Segger automatically take over the UART port?

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