[nRF5340 + nRF7002] nRF7002 wifi probe failure on custom project

Hello,

Development Environment :
SDK version: nRF Connect SDK v2.7.0
Toolchain version: nRF Connect SDK Toolchain v2.7.0
Development environment: Ubuntu 22.04
Development tool: Visual Studio Code
Development board: nrf5340dk_nrf5340_cpuapp_ns + nrf7002ek shield
Example refference path: ~/ncs/v2.7.0/nrf/samples/wifi/sta
We are using a custom board for our project, on it we have a nrf7002 wifi chip interfaced with nrf5340 SoC over SPI interface.
Till now our project code was based on ncs v2.7.0, with the sdk everything was working fine, including wifi. Note, Our project has https, wifi, and ble. We have enabled the ble co-existence.

Now, we have migrated our code from ncs v2.7.0 to ncs v3.0.0 and the wifi has stopped working with our project.
We are getting a wifi probe failure at bootup. The wifi configuration is same as the sample code in our project.
We have tested wifi sta sample code mentioned above. We don't get the probe failure with the sample code.
We need an assitance on what could be interfering with the wifi operation on our project firmware.
Attaching the error logs of wifi probe failure and of wifi sample code as well.
Thanks.
E: RPU wakeup write ACK failed even after 10ms
E: Error: RDSR2 failed
E: zep_shim_bus_qspi_dev_add: RPU enable failed with error -1
E: nrf_wifi_bus_qspi_dev_add: nrf_wifi_osal_bus_qspi_dev_add failed
E: nrf_wifi_bal_dev_add: Bus dev_add failed
E: nrf_wifi_sys_hal_dev_add: nrf_wifi_bal_dev_add failed
E: nrf_wifi_sys_fmac_dev_add: nrf_wifi_sys_hal_dev_add failed
E: nrf_wifi_fmac_dev_add_zep: nrf_wifi_fmac_dev_add failed
E: nrf_wifi_if_start_zep: nrf_wifi_fmac_dev_add_zep failed
*** Booting My Application v0.0.2-af98bf76394e ***
*** Using nRF Connect SDK v3.0.0-3bfc46578e42 ***
*** Using Zephyr OS v4.0.99-a0e545cb437a ***
I: Application version 0.0.2
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
E: nrf_wifi_wpa_supp_set_key: rpu_ctx_zep is NULL
E: _wpa_drv_zep_set_key: set_key op failed
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