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How to practically debug with pca10028?

Silly question, but I haven't gotten into a good rhythm with the debugger. Every time I try to use the debugger when a soft device is programmed, I can't seem to ever hit a breakpoint. What do I need to know about debugging in this environment? I understand that I can't step into a soft-device (sd_) call, but does this mean I can't debug at all when the soft device is programmed?

How are we expected to practically debug?

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