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Asset Tracker Code Editing Guide/Sample

Hi Nordic

We are developing our IOT product and we are starting our development of firmware on nRF9160 DK so that we can port that code to our custom PCB that will contain nRF9160.

As i have read the documentation and setuped whole nRF Hardware and cloud etc. Asset Tracker code is running fine and its data is being displayed on nRF Cloud as well. 

And i m satisfied with the performace of it. But now i m going into the customization phase but i m stuck as where to start the development in the code. 

I need following support in the firmware alongside asset tracker : 

1. Communication with another MCU via UART.

2. Control GPIO's for Fan and LEDs as per custom application.

3. Offline data storage in SD Card.

4. Send data to AWS IOT cloud rather than nRF Cloud

5. Read some thermistors from ADC

6. Interface an accelerometer on SPI interface.

As in our previous revisions of the PCB, i have already done all of this with STM32 MCU and another LTE module. Now we want to use nRF 9160 SiP and my firmware will be designed again from scratch. 

I am fine with the asset tracking feature as it is very good, power saving and sophisticated but in parallel of that i need those 6 features as well that i listed above.

I have read alot of docs provided by nRF and explored Segger Embedded Studio. Even i have used SES to program the nRF DK. But i cant find the files to edit in .C and add the extra features. In SES all files are binary and other files. No C Files are there.

So i m confused there where should i start editing the code and add the above mentioned features. 
If there is a guide or youtube video that will be very helpful. 

Thanks alot . 

Waiting for the response.

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